Merge branch 'dev_Jules' into 'master' (e0c2f97e) · Commits · GeT-nextflow-NGL-Bi / wf-Illumina-nf · GitLab

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e0c2f97e

Commit e0c2f97e authored 1 year ago by Jules Sabban

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Merge branch 'dev_Jules' into 'master'

Make the workflow runnable for technological developments

See merge request !6

parents 949f5d19 b211ff7a

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Changes 8
Pipelines 2

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bin/DTM/data_prepare.pl 1 addition, 0 deletions

bin/DTM/data_prepare.pl
conf/base.config 1 addition, 1 deletion

conf/base.config
modules/local/module_core.nf 3 additions, 3 deletions

modules/local/module_core.nf
nextflow.config 3 additions, 0 deletions

nextflow.config
sub-workflows/local/begin_nglbi.nf 4 additions, 2 deletions

sub-workflows/local/begin_nglbi.nf
sub-workflows/local/core_illumina.nf 51 additions, 0 deletions

sub-workflows/local/core_illumina.nf
sub-workflows/local/core_pipeline.nf 7 additions, 28 deletions

sub-workflows/local/core_pipeline.nf
workflow/illumina_qc.nf 11 additions, 6 deletions

workflow/illumina_qc.nf

with 81 additions and 40 deletions

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